<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
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<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
<title>BioCASe Interface: Collections & Institutions> Basic Search </title>
<link rel="stylesheet" style="text/css" href="static/css/tao.css">
<link rel="stylesheet" style="text/css" href="static/css/style.css">
<script src="lib.js"></script>
<script src="static/js/general.js" type="text/javascript"></script>
<script language="JavaScript" type="text/JavaScript">
function getHref(val)
{
return document.location.href + val;
}
</script>
<title>BIOCASE User Interface</title>
</head>
<%@ page import="gui.collections.input.BrowseManager" %>
<%@ page import="gui.collections.output.ResultDisplay" %>
<%@ page import="gui.common.settings.UIConst" %>
<%@ page import="gui.common.management.UIManager" %>
<jsp:useBean id="browsing" scope="session" class="gui.collections.input.BrowseManager"/>
<jsp:useBean id="manager" scope="session" class="gui.common.management.UIManager"/>
<%manager.setSearchType(UIConst.METADATA_BROWSE);%>
<%manager.setScreenID(UIConst.METADATA_BROWSE);%>
<%manager.setAdditionalTitle("");%>
<%-- ******************Menu Browsing***************************** --%>
<%String mode=request.getParameter("Mode");%>
<%if (mode == null) mode= "List";%>
<body leftmargin="0" topmargin="0" id="searchPage">
<!-- top.jsp start -->
<jsp:include page="top.jsp">
<jsp:param name="scrumb" value="
<li>»<a href=\"http://search.biocase.org/synth-ui/search/\" title=\"Search\">Search</a></li>
<li>»<a href=\"http://search.biocase.org/gui/metadata.jsp\" title=\"Search in metadata\">Metadata</a></li>
<li>»<a href=\"http://search.biocase.org/gui/Browse.jsp\" title=\"Browse metadata\">Browse</a></li>
"/>
</jsp:include>
<!-- top.jsp end -->
<div id="content">
<INPUT TYPE = "hidden" value= "empty" NAME= "redirection">
<p class="pageTitle">Topics related to organizations and collections</p>
<%if ( mode.equals("List")){%>
<DL>
<DT><STRONG>Browse Information about Data Holders</STRONG>
<DD>
<UL>
<LI><a href="Browse.jsp?Mode=NETWORKS">Networks</a></LI>
<LI><a href="Browse.jsp?Mode=Institutions">Organisations</a></LI>
<LI><a href="Browse.jsp?Mode=Collections">Collections</a></LI>
<LI><a href="Browse.jsp?Mode=ALPHABET_PERSON">Persons</A></LI>
<LI><a href="Browse.jsp?Mode=Localization">Location</a></LI>
</UL>
<DT><STRONG>Browse Information about Collection Contents</STRONG>
<DD>
<UL>
<LI><a href="Browse.jsp?Mode=TIMEPERIOD_COVERAGE">Coverage in time period</a></LI>
<LI><a href="Browse.jsp?Mode=ALPHABET_TAXONOMIC_COVERAGE">Scientific name</a></LI>
<LI><a href="Browse.jsp?Mode=ALPHABET_COMMON_NAME_COVERAGE">Common name</a></LI>
<LI><a href="Browse.jsp?Mode=ALPHABET_GEO_COVERAGE">Geographic name</a></LI>
</UL>
</DL>
</P>
<%}%>
<div id="submenu">
<INPUT TYPE="button" value="Back"
TITLE ="return to previous page"
onclick="history.go(-1)" >
<INPUT TYPE="button" VALUE="List of topics" value="Topics related to organizations and collections" TITLE="display list of topics" onclick="location.replace('Browse.jsp?Mode=List')" >
</div>
<%String parameter =request.getParameter("ID");%>
<%try {%>
<%if (mode.equals("NETWORKS")){%>
<%= browsing.displayTitle(manager.getText("browse_t_networks"),manager.getText("browse_h_networks"), "HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("NETWORKS","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("TIMEPERIOD_COVERAGE")){%>
<%= browsing.displayTitle(manager.getText("browse_t_timeperiod"),manager.getText("browse_h_timeperiod"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getList("TIMEPERIOD_COVERAGE","KEYWORDS")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Localization")){%>
<%= browsing.displayTitle(manager.getText("browse_t_countries"), manager.getText("browse_h_countries"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COUNTRY","Localization_2")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Localization_2")){%>
<%String country = browsing.getCountryName(parameter); %>
<%= browsing.displayTitle(manager.getText("browse_t_country_title") + "<I> " + country + "</I>",manager.getText("browse_h_country_selected"),"HELP_SEARCH_UL_BROWSE")%>
<P><FONT CLASS= "title_font"> <%=manager.getText("browse_t_towns")%></FONT></P>
<P>
<%=browsing.getList("TOWNS","Localization_3", parameter, false)%>
</P>
<P><FONT CLASS= "title_font"> <%=manager.getText("browse_t_regions")%>  </FONT></P>
<P>
<%=browsing.getList("REGIONS","Localization_3_1", parameter, false)%>
</P>
<P><FONT CLASS= "title_font"> <%out.println(manager.getText("browse_t_lists") + "<I> " + country + "</I>");%></FONT></P>
<UL>
<LI><%out.println ("<a href=\""+ manager.getLink("BROWSING_INPUT_FILE") +"?Mode=Net_Country&ID=" + parameter + "\">"+manager.getText("browse_t_all_networks") + "<I> " + country + "</I></A><BR>"); %></LI>
<LI><%out.println ("<a href=\""+ manager.getLink("BROWSING_INPUT_FILE") + "?Mode=Org_Country&ID=" + parameter + "\">"+manager.getText("browse_t_all_organisations") + "<I> " + country +"</I></A><BR>"); %></LI>
<LI><%out.println ("<a href=\""+ manager.getLink("BROWSING_INPUT_FILE")+ "?Mode=Col_Country&ID=" + parameter + "\">"+manager.getText("browse_t_all_collections")+ "<I> " + country + "</I></A><BR>"); %></LI>
</UL>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Net_Country")){%>
<%= browsing.displayTitle(manager.getText("browse_t_list_of_networks_in") + " <I>" + browsing.getCountryName(parameter) + "</I>",manager.getText("browse_h_item_selected"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COUNTRYXNETWORK","ITEM_DETAIL",parameter, false)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Org_Country")){%>
<%out.println (browsing.displayTitle(manager.getText("browse_t_list_of_org_in") + " <I>" + browsing.getCountryName(parameter) + "</I>",manager.getText("browse_h_item_selected"),"HELP_SEARCH_UL_BROWSE"));
out.println ("<P>" );
out.println (browsing.getListWithId("COUNTRYXORGANISATION","ITEM_DETAIL",parameter, false));
out.println ("</P>" );%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Col_Country")){%>
<%= browsing.displayTitle(manager.getText("browse_t_list_of_coll_in") + " <I>" + browsing.getCountryName(parameter) + "</I>",manager.getText("browse_h_item_selected"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COUNTRYXCOLLECTION","ITEM_DETAIL", parameter, false)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Localization_3")){%>
<%= browsing.displayTitle(manager.getText("browse_t_list_of_all_in") + " <I>" + parameter + "</I>",manager.getText("browse_h_item_selected"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("TOWNSXBODY", "ITEM_DETAIL", parameter, true)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Localization_3_1")){%>
<%= browsing.displayTitle(manager.getText("browse_t_list_of_all_in_region") + " <I>" + parameter + "</I>",manager.getText("browse_h_item_selected"),"HELP_SEARCH_UL_BROWSE")%>
<P><%=browsing.getListWithId("REGIONSXBODY" ,"ITEM_DETAIL", parameter , true)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("KEYWORDS")){%>
<%= browsing.displayTitle(manager.getText("browse_t_list_of_coll_with") + " <I>" + parameter + "</I>",manager.getText("browse_h_collections_alph_sect"),"HELP_SEARCH_UL_BROWSE")%>
<%=browsing.getListWithId("KEYWORDSXBODY","ITEM_DETAIL", parameter, false)%>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("CollectionsList_A_D")){%>
<%= browsing.displayTitle(manager.getText("browse_t_coll_names") + " (A-D)",manager.getText("browse_h_collections_alph_sect"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COLLECTIONS_A_D","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("CollectionsList_E_H")){%>
<%= browsing.displayTitle(manager.getText("browse_t_coll_names") + " (E-H)",manager.getText("browse_h_collections_alph_sect"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COLLECTIONS_E_H","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("CollectionsList_I_L")){%>
<%= browsing.displayTitle(manager.getText("browse_t_coll_names") + " (I-L)",manager.getText("browse_h_collections_alph_sect"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COLLECTIONS_I_L","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("CollectionsList_M_P")){%>
<%= browsing.displayTitle(manager.getText("browse_t_coll_names") + " (M-P)",manager.getText("browse_h_collections_alph_sect"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COLLECTIONS_M_P","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("CollectionsList_Q_T")){%>
<%= browsing.displayTitle(manager.getText("browse_t_coll_names") + " (Q-T)",manager.getText("browse_h_collections_alph_sect"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COLLECTIONS_Q_T","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("CollectionsList_U_Z")){%>
<%= browsing.displayTitle(manager.getText("browse_t_coll_names") + " (U-Z)",manager.getText("browse_h_collections_alph_sect"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("COLLECTIONS_U_Z","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Org_All_A_D")){%>
<%= browsing.displayTitle(manager.getText("browse_t_org_alph_list") + " (A-D)", manager.getText("browse_h_org_alph_list"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("ORGANISATIONS_A_D","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Org_All_E_H")){%>
<%= browsing.displayTitle(manager.getText("browse_t_org_alph_list") + " (E-H)",manager.getText("browse_h_org_alph_list"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("ORGANISATIONS_E_H","ITEM_DETAIL")%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Org_All_I_L")){%>
<P>
<%= browsing.displayTitle(manager.getText("browse_t_org_alph_list") + " (I-L)",manager.getText("browse_h_org_alph_list"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("ORGANISATIONS_I_L","ITEM_DETAIL")%>
</P><%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Org_All_M_P")){%>
<%= browsing.displayTitle(manager.getText("browse_t_org_alph_list") + " (M-P)",manager.getText("browse_h_org_alph_list"),"HELP_SEARCH_UL_BROWSE")%>
<%=browsing.getListWithId("ORGANISATIONS_M_P","ITEM_DETAIL")%>
</P> <%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Org_All_Q_T")){%>
<%= browsing.displayTitle(manager.getText("browse_t_org_alph_list") + " (Q-T)",manager.getText("browse_h_org_alph_list"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("ORGANISATIONS_Q_T","ITEM_DETAIL")%>
</P> <%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Org_All_U_Z")){%>
<%= browsing.displayTitle(manager.getText("browse_t_org_alph_list") + " (U-Z)",manager.getText("browse_h_org_alph_list"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("ORGANISATIONS_U_Z","ITEM_DETAIL")%>
</P><%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("ITEM_DETAIL")){%>
<%= browsing.displayTitle(manager.getText("browse_t_detail"),manager.getText("browse_h_detail"),"HELP_SEARCH_UL_BROWSE")%>
<P><%ResultDisplay displ = new ResultDisplay(); %>
<%=displ.displayDetail(manager,parameter, false)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("PERSONSXBODY")){%>
<%= browsing.displayTitle(manager.getText("browse_t_persons_list_related") + "<I> " + parameter + "</I>",manager.getText("browse_h_item_selected"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.getListWithId("PERSONSXBODY","ITEM_DETAIL", parameter, false)%>
<BR></P><%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("ALPHABET_PERSON")){%>
<%= browsing.displayTitle(manager.getText("browse_t_full_persons"),manager.getText("browse_h_sequence_persons"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.alphabeticalPersonsList(parameter)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("ALPHABET_TAXONOMIC_COVERAGE")){%>
<%= browsing.displayTitle(manager.getText("browse_t_full_cover_scient_name"),manager.getText("browse_h_sequence_scient_name"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.alphabeticalTaxKeywordsList(parameter)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("ALPHABET_COMMON_NAME_COVERAGE")){%>
<%= browsing.displayTitle(manager.getText("browse_t_full_cover_com_name"),manager.getText("browse_h_sequence_comm_name"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.alphabeticalCommonKeywordsList(parameter)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("ALPHABET_GEO_COVERAGE")){%>
<%= browsing.displayTitle(manager.getText("browse_t_full_cover_geo_name"),manager.getText("browse_h_sequence_geo"),"HELP_SEARCH_UL_BROWSE")%>
<P>
<%=browsing.alphabeticalGeoKeywordsList(parameter)%>
</P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Institutions")){%>
<P>
<%= browsing.displayTitle(manager.getText("browse_t_all_org"),manager.getText("browse_h_instit"),"HELP_SEARCH_UL_BROWSE")%>
<BR>
<BR><%= browsing.displayTitle(manager.getText("browse_t_alp_list_org"),manager.getText("browse_h_instit"),"HELP_SEARCH_UL_BROWSE")%><UL>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=Org_All_A_D\">A-D</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=Org_All_E_H\">E-H</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=Org_All_I_L\">I-L</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=Org_All_M_P\">M-P</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=Org_All_Q_T\">Q-T</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=Org_All_U_Z\">U-Z</A>");%>
</UL></P><P>
<%= browsing.displayTitle(manager.getText("browse_t_alp_list_org_cat"),manager.getText("browse_h_instit"),"HELP_SEARCH_UL_BROWSE")%>
<%=browsing.organisationsType()%></P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("Collections")){%>
<%= browsing.displayTitle(manager.getText("browse_t_all_coll"),manager.getText("browse_h_coll"),"HELP_SEARCH_UL_BROWSE")%>
<BR><BR><%= browsing.displayTitle(manager.getText("browse_t_alp_list_col"),manager.getText("browse_h_instit"),"HELP_SEARCH_UL_BROWSE")%>
<UL>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=CollectionsList_A_D\">A-D</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=CollectionsList_E_H\">E-H</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=CollectionsList_I_L\">I-L</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=CollectionsList_M_P\">M-P</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=CollectionsList_Q_T\">Q-T</A>");%>
<%out.println ("<LI><a href=\"" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=CollectionsList_U_Z\">U-Z</A>");%>
</UL></P><P>
<%= browsing.displayTitle(manager.getText("browse_t_coll_category"),manager.getText("browse_h_coll"),"HELP_SEARCH_UL_BROWSE")%>
</P><%=browsing.collectionClass()%>
<P><%= browsing.displayTitle(manager.getText("browse_t_coll_obj"),manager.getText("browse_h_coll"),"HELP_SEARCH_UL_BROWSE")%>
<%=browsing.objectClass()%></P>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("organisation_type_spec")){%>
<%= browsing.displayTitle(manager.getText("browse_t_organisation_type_spec")+ ": <I>" + parameter + "</I>",manager.getText("browse_h_organisation_type_spec"),"HELP_SEARCH_UL_BROWSE")%>
<%=browsing.organisationsTypeSpecified(parameter)%>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("collection_object_spec")){%>
<%= browsing.displayTitle(manager.getText("browse_t_collection_object_spec")+ ": <I>" + parameter + "</I>", manager.getText("browse_h_collection_object_spec"),"HELP_SEARCH_UL_BROWSE")%>
<%=browsing.objectClassSpecified(parameter)%>
<%}%>
<%-- ********************************************************************* --%>
<%if (mode.equals("collection_class_spec")){%>
<%= browsing.displayTitle(manager.getText("browse_t_collection_class_spec") + ": <I>" + parameter + "</I>",manager.getText("browse_h_collection_class_spec"),"HELP_SEARCH_UL_BROWSE")%>
<%=browsing.collectionClassSpecified (parameter)%>
<%}%>
<%-- ****************************End of selection*********************************** --%>
<%-- *****************************Buttons********************************** --%>
<%if (! mode.equals("List")){%>
<FORM>
<INPUT TYPE="button" value="<%=manager.getText("btn_Previous")%>"
onclick="history.go(-1)" TITLE="<%=manager.getText("btn_Previous_t")%>"
<%out.println("<INPUT TYPE=\"button\" TITLE= \"" +manager.getText("btn_List_of_topics_t")+"\" value=\"" + manager.getText("btn_List_of_topics") + "\" onclick=\"location.replace('" + manager.getLink("BROWSING_INPUT_FILE") + "?Mode=List')\" >");%>
</FORM>
<%}%>
<%}
catch (Exception e)
{}
%>
<br/><br/>
<ul>
<li>»Switch to <a href="MetadataBasicSearch.jsp">Simple Search</a></li>
<li>»Switch to <a href="MetadataAdvancedSearch.jsp">Advanced Search</a></li>
</ul>
</div> <!-- Content -->
<jsp:include page="bottom.jsp">
<jsp:param name="Header" value="1" />
</jsp:include>
</body>
</html>